Untitled Document

CropStoreDB for Bambara groundnut (Vigna subterranea)

Introduction

Bambara groundnut has been identified as an exemplar underutilised crop for R&D associated with Crops For the Future and the University of Nottingham Future Food Beacon. Southern Cross Plant Science is providing additional input for nutritional characterisation, knowledge representation and data management.

Current R&D and outputs

Andrés-Hernández L, Azman Halimi R, Mauleon R, Mayes S, Baten A, King GJ (2021) Challenges for FAIR-compliant description and comparison of crop phenotype data with standardized controlled vocabularies. Database. Volume 2021: baab028. doi:10.1093/database/baab028.

Supplementary data (Excel files)
Data curation
Public domain - CC BY 4.0

Data description and knowledge representation

Structured data

plant genetic resources, populations

phenotypic traits

agronomic, yield

nutritional composition

linkage maps --> genome

Controlled vocabularies and ontologies

trait dictionary and crop ontology for bambara groundnut

Crop Dietary Nutrition Ontology

Original trait descriptors from IPGRI (2000)

Curation of structured data

Initial datasets have been curated through the CropStoreDB pipeline and represent field phenotypic data from a University of Nottingham PhD project.

Graphic user interfaces

Web searchable

Windows pc standalone app

Editor: Graham King

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